Suggested exercises#
Install dependencies, download the data, and run the notebooks to test whether dependencies were installed correctly.
Run
10_label_augment_train\03_napari_layers
and practice interacting with Napari Layers in a notebook.Run the notebooks in
10_label_augment_train
on one of your own images. Label a single ROI and try to train a model to detect object in the rest of the image.Run the notebooks in
15_sparse_labeling
, add additional labels and try to improve the clustered ladybug detection.Run the notebook in
20_scale\20_cell_pose_diameter.ipynb
, and try tweaking the test image (for example make the spheres closer together or even overlapping)Run the notebooks 30 through 50 in
20_scale
and try to train a cellpose model to detect ladybugs at different scales.Run notebook
20_scale\80_protrusions
on one of your own tough images, and try to get perfect results self-predicting a single image.Run notebook
20_mobile_sam
or30_filter_labels
and try to find a filterset that finds ladybugs and discards other objects.